Hamdi MBAREK
Dr Hamdi Mbarek

Molecular Geneticist

ABOUT ME

I’m an Assistant Professor at the Department of Biological Psychology of the Faculty of Behavioural and Movement Sciences of the Vrije Universiteit (VU) Amsterdam, The Netherlands. My background is in Molecular & Cellular Biology with a focus on Genomics. I am also a visiting researcher at Avera Institute for Human Genetics, Sioux Falls, SD, USA.
I’m very fortunate to be given the opportunity to study and work in many countries that allowed me to grow my skills as a researcher. Aside from work, I like travelling, reading and sailing. 

Please see my CV for an overview of my curriculum steps.

Thanks for visiting my website!

Hamdi MBAREK

RESEARCH

My research interests are mainly in genetic and epidemiological analyses of complexe traits. I am also interested in the genetics of Twinning, this fascinating traits with its two variants: fraternal and identical twins. Recently, I focused on the genetics of substance use disorders especially Alcohol and Cannabis.

In Publications you can find a list of my articles including some links to the pdf of the papers. In Media & Press you can find an overview of my research in the media.

PUBLICATIONS

For links or PDF’s of my papers, please see Google Scholar or ResearchGate.

Barban N, Jansen R, de Vlaming R, Vaez A, Mandemakers JJ, Tropf FC, [..], Mbarek H, [..], Benjamin DJ, Cesarini D, Koellinger PD, den Hoed M, Snieder H, Mills MC. Genome-wide analysis identifies 12 loci influencing human reproductive behavior. Nature Genetics. 2016 Oct 31. doi:10.1038/ng.3698. PMID:27798627 
 
 
Mbarek H, Dolan CV, Boomsma DI. Two SNPs Associated With Spontaneous Dizygotic Twinning: Effect Sizes and How We Communicate Them. Twin Res Hum Genet. 2016 Jul 13:1-4. PMID 27406421
 
 
Mbarek H, Steinberg S, Nyholt DR, Gordon SD, Miller MB, McRae AF, Hottenga JJ, Day FR, Willemsen G, de Geus EJ, Davies GE, Martin HC, Penninx BW, Jansen R, McAloney K, Vink JM, Kaprio J, Plomin R, Spector TD, Magnusson PK, Reversade B, Harris RA, Aagaard K, Kristjansson RP, Olafsson I, Eyjolfsson GI, Sigurdardottir O, Iacono WG, Lambalk CB, Montgomery GW, McGue M, Ong KK, Perry JR, Martin NG, Stefánsson H, Stefánsson K, Boomsma DI. Identification of Common Genetic Variants Influencing Spontaneous Dizygotic Twinning and Female Fertility. Am J Hum Genet. 2016 Apr 27. pii: S0002-9297(16)30043-X. doi: 10.1016/j.ajhg.2016.03.008.PMID: 27132594
 
 
Amin N, Allebrandt KV, van der Spek A, Müller-Myhsok B, Hek K, Teder-Laving M, Hayward C, Esko T, van Mill JG, Mbarek H, Watson NF, Melville SA, Del Greco FM, Byrne EM, Oole E, Kolcic I, Chen TH, Evans DS, Coresh J, Vogelzangs N, Karjalainen J, Willemsen G, Gharib SA, Zgaga L, Mihailov E, Stone KL, Campbell H, Brouwer RW, Demirkan A, Isaacs A, Dogas Z, Marciante KD, Campbell S, Borovecki F, Luik AI, Li M, Hottenga JJ, Huffman JE, van den Hout MC, Cummings SR, Aulchenko YS, Gehrman PR, Uitterlinden AG, Wichmann HE, Müller-Nurasyid M, Fehrmann RS, Montgomery GW, Hofman A, Kao WH, Oostra BA, Wright AF, Vink JM, Wilson JF, Pramstaller PP, Hicks AA, Polasek O, Punjabi NM, Redline S, Psaty BM, Heath AC, Merrow M, Tranah GJ, Gottlieb DJ, Boomsma DI, Martin NG, Rudan I, Tiemeier H, van IJcken WF, Penninx BW, Metspalu A, Meitinger T, Franke L, Roenneberg T, van Duijn CM. Genetic variants in RBFOX3 are associated with sleep latency. Eur J Hum Genet. 2016 May 4. doi: 10.1038/ejhg.2016.31. PMID: 27142678
 

van Leeuwen EM, Sabo A, Bis JC, Huffman JE, Manichaikul A, Smith AV, Feitosa MF, Demissie S, Joshi PK, Duan Q, Marten J, van Klinken JB, Surakka I, Nolte IM, Zhang W, Mbarek H, …, Rotter JI, Cupples LA, van Duijn CM. Meta-analysis of 49 549 individuals imputed with the 1000 Genomes Project reveals an exonic damaging variant in ANGPTL4 determining fasting TG levels. Journal of Medical Genetics. 2016 Apr 1. doi: 10.1136/jmedgenet-2015-103439. PMID: 27036123

Stringer S, Minică CC, Verweij KJ, Mbarek H, Bernard M, Derringer J, van Eijk KR,…, Gelernter J, Boomsma DI, Iacono WG, Martin NG, Gillespie NA, Derks EM, Vink JM. Genome-wide association study of lifetime cannabis use based on a large meta-analytic sample of 32 330 subjects from the International Cannabis Consortium. Translational Psychiatry. 2016 Mar 29;6:e769. doi: 10.1038/tp.2016.36. PMID: 27023175

Minicã CC, Mbarek H, Pool R, Dolan CV, Boomsma DI, Vink JM. Pathways to smoking behaviours: biological insights from the Tobacco and Genetics Consortium meta-analysis. Molecular Psychiatry. 2016 Mar 29. doi: 10.1038/mp.2016.20. PMID: 27021816

Nivard MG, Verweij KJ, Minică CC, Treur JL; International Cannabis Consortium, Vink JM, Boomsma DI. Connecting the dots, genome-wide association studies in substance use. Molecular Psychiatry. 2016 Mar 15. doi: 10.1038/mp.2016.14. PMID: 26976040

Linneberg A, Jacobsen RK, Skaaby T, Taylor AE, Fluharty ME, Jeppesen JL, Bjorngaard JH, Åsvold BO, Gabrielsen ME, Campbell A, Marioni RE, Kumari M, Marques-Vidal P, Kaakinen M, Cavadino A, Postmus I, Ahluwalia TS, Wannamethee SG, Lahti J, Räikkönen K, Palotie A, Wong A, Dalgård C, Ford I, Ben-Shlomo Y, Christiansen L, Kyvik KO, Kuh D, Eriksson JG, Whincup PH, Mbarek H, de Geus EJ, Vink JM, Boomsma DI,…, Munafò MR, Jarvelin MR, Husemoen LL. Effect of Smoking on Blood Pressure and Resting Heart Rate: A Mendelian Randomization Meta-Analysis in the CARTA Consortium. Circulation: Cardiovascular Genetics. 2015 Dec;8(6):832-41. doi: 10.1161/CIRCGENETICS.115.001225. PMID: 26538566

Mbarek H, Milaneschi Y, Fedko IO, Hottenga JJ, de Moor MH, Jansen R, Gelernter J, Sherva R, Willemsen G, Boomsma DI, Penninx BW, Vink JM. The genetics of alcohol dependence: Twin and SNP-based heritability, and genome-wide association study based on AUDIT scores. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics. 2015 Dec;168(8):739-48. doi: 10.1002/ajmg.b.32379. PMID: 26365420

van den Berg SM, de Moor MH, Verweij KJ, Krueger RF, Luciano M, Arias Vasquez A, Matteson LK, Derringer J, Esko T, Amin N, Gordon SD, Hansell NK, Hart AB, Seppälä I, Huffman JE, Konte B, Lahti J, Lee M, Miller M, Nutile T, Tanaka T, Teumer A, Viktorin A, Wedenoja J, Abdellaoui A, Abecasis GR, Adkins DE, Agrawal A, Allik J, Appel K, Bigdeli TB, Busonero F, Campbell H, Costa PT, Smith GD, Davies G, de Wit H, Ding J, Engelhardt BE, Eriksson JG, Fedko IO, Ferrucci L, Franke B, Giegling I, Grucza R, Hartmann AM, Heath AC, Heinonen K, Henders AK, Homuth G, Hottenga JJ, Iacono WG, Janzing J, Jokela M, Karlsson R, Kemp JP, Kirkpatrick MG, Latvala A, Lehtimäki T, Liewald DC, Madden PA, Magri C, Magnusson PK, Marten J, Maschio A, Mbarek H, Medland SE,…, Pedersen NL, Terracciano A, McGue M, Martin NG, Boomsma DI. Meta-analysis of Genome-Wide Association Studies for Extraversion: Findings from the Genetics of Personality Consortium. Behavior Genetics. 2016 Mar;46(2):170-82. doi: 10.1007/s10519-015-9735-5. Epub 2015 Sep 11. PMID: 26362575

Martin HC, Christ R, Hussin JG, O’Connell J, Gordon S, Mbarek H, Hottenga JJ, McAloney K, Willemsen G, Gasparini P, Pirastu N, Montgomery GW, Navarro P, Soranzo N, Toniolo D, Vitart V, Wilson JF, Marchini J, Boomsma DI, Martin NG, Donnelly P. Multicohort analysis of the maternal age effect on recombination.Nature Communication. 2015 Aug 5;6:7846. doi: 10.1038/ncomms8846. PMID: 26242864

Lin BD, Mbarek H, Willemsen G, Dolan CV, Fedko IO, Abdellaoui A, de Geus EJ, Boomsma DI, Hottenga JJ. Heritability and Genome-Wide Association Studies for Hair Color in a Dutch Twin Family Based Sample. Genes (Basel). 2015 Jul 13;6(3):559-76. doi: 10.3390/genes6030559. PMID: 26184321 Free PMC Article

Milaneschi Y, Lamers F, Peyrot WJ, Abdellaoui A, Willemsen G, Hottenga JJ, Jansen R, Mbarek H, Dehghan A, Lu C; CHARGE inflammation working group, Boomsma DI, Penninx BW. Polygenic dissection of major depression clinical heterogeneity. Molecular Psychiatry. 2016 Apr;21(4):516-22. doi: 10.1038/mp.2015.86. PMID: 26122587

Minică CC, Dolan CV, Hottenga JJ, Pool R; Genome of the Netherlands Consortium, Fedko IO, Mbarek H, Huppertz C, Bartels M, Boomsma DI, Vink JM. Heritability, SNP- and Gene-Based Analyses of Cannabis Use Initiation and Age at Onset. Behavior Genetics. 2015 Sep;45(5):503-13. doi: 10.1007/s10519-015-9723-9. PMID: 25987507

van Leeuwen EM, Karssen LC, Deelen J, Isaacs A, Medina-Gomez C, Mbarek H, Kanterakis A, Trompet S, Postmus I,…, van Ommen GJ, de Bakker PI, Eline Slagboom P, Boomsma DI, Wijmenga C, van Duijn CM. Genome of The Netherlands population-specific imputations identify an ABCA6 variant associated with cholesterol levels. Nature Communication. 2015 Mar 9;6:6065. doi: 10.1038/ncomms7065. PMID: 25751400

Abdellaoui A, Ehli EA, Hottenga JJ, Weber Z, Mbarek H, Willemsen G, van Beijsterveldt T, Brooks A, Hudziak JJ, Sullivan PF, de Geus EJ, Davies GE, Boomsma DI. CNV Concordance in 1,097 MZ Twin Pairs. Twin Research Human Genetics. 2015 Feb;18(1):1-12. doi: 10.1017/thg.2014.86. PMID: 25578775

Korhonen T, Loukola A, Wedenoja J, Nyman E, Latvala A, Broms U, Häppölä A, Paunio T, Schrage AJ, Vink JM, Mbarek H, Boomsma DI, Penninx BW, Pergadia ML, Madden PA, Kaprio J. Role of nicotine dependence in the association between the dopamine receptor gene DRD3 and major depressive disorder. PLoS One. 2014 Jun 13;9(6):e98199. doi: 10.1371/journal.pone.0098199. eCollection 2014. PMID: 24927283

van Dongen J, Jansen R, Smit D, Hottenga JJ, Mbarek H, Willemsen G, Kluft C; AAGC Collaborators, Penninx BW, Ferreira MA, Boomsma DI, de Geus EJ. The contribution of the functional IL6R polymorphism rs2228145, eQTLs and other genome-wide SNPs to the heritability of plasma sIL-6R levels. Behavior Genetics. 2014 Jul;44(4):368-82. doi: 10.1007/s10519-014-9656-8. PMID: 24791950

Milaneschi Y, Lamers F, Mbarek H, Hottenga JJ, Boomsma DI, Penninx BW. The effect of FTO rs9939609 on major depression differs across MDD subtypes.Molecular Psychiatry. 2014 Sep;19(9):960-2. doi: 10.1038/mp.2014.4. Epub 2014 Feb 4. PMID: 24492350

Jansen R, Batista S, Brooks AI, Tischfield JA, Willemsen G, van Grootheest G, Hottenga JJ, Milaneschi Y, Mbarek H, Madar V, Peyrot W, Vink JM, Verweij CL, de Geus EJ, Smit JH, Wright FA, Sullivan PF, Boomsma DI, Penninx BW. Sex differences in the human peripheral blood transcriptome. BMC Genomics. 2014 Jan 17;15:33. doi: 10.1186/1471-2164-15-33. PMID: 24438232

Nivard MG, Mbarek H, Hottenga JJ, Smit JH, Jansen R, Penninx BW, Middeldorp CM, Boomsma DI. Further confirmation of the association between anxiety and CTNND2: replication in humans. Genes Brain and Behavior. 2014 Feb;13(2):195-201. doi: 10.1111/gbb.12095. Epub 2013 Nov 21. PMID: 24256404

Willemsen G, Vink JM, Abdellaoui A, den Braber A, van Beek JH, Draisma HH, van Dongen J, van ‘t Ent D, Geels LM, van Lien R, Ligthart L, Kattenberg M,Mbarek H, de Moor MH, Neijts M, Pool R, Stroo N, Kluft C, Suchiman HE, Slagboom PE, de Geus EJ, Boomsma DI. The Adult Netherlands Twin Register: twenty-five years of survey and biological data collection. Twin Research and Human Genetics. 2013 Feb;16(1):271-81. doi: 10.1017/thg.2012.140. Epub 2013 Jan 8. PMID: 23298648

Kumar V, Yi Lo PH, Sawai H, Kato N, Takahashi A, Deng Z, Urabe Y, Mbarek H, Tokunaga K, Tanaka Y, Sugiyama M, Mizokami M, Muroyama R, Tateishi R, Omata M, Koike K, Tanikawa C, Kamatani N, Kubo M, Nakamura Y, Matsuda K. Soluble MICA and a MICA variation as possible prognostic biomarkers for HBV-induced hepatocellular carcinoma. PLoS One. 2012;7(9):e44743. Epub 2012 Sep 14. PMID: 23024757

Sawai H, Nishida N, Mbarek H, Matsuda K, Mawatari Y, Yamaoka M, Hige S, Kang JH, Abe K, Mochida S, Watanabe M, Kurosaki M, Asahina Y, Izumi N, Honda M, Kaneko S, Tanaka E, Matsuura K, Itoh Y, Mita E, Korenaga M, Hino K, Murawaki Y, Hiasa Y, Ide T, Ito K, Sugiyama M, Ahn SH, Han KH, Park JY, Yuen MF, Nakamura Y, Tanaka Y, Mizokami M, Tokunaga K. No association for Chinese HBV-related hepatocellular carcinoma susceptibility SNP in other East Asian populations. BMC Medical Genetics. 2012 Jun 19;13:47. doi: 10.1186/1471-2350-13-47. PMID: 22712471

Mbarek H, Ochi H, Urabe Y, Kumar V, Kubo M, Hosono N, Takahashi A, Kamatani Y, Miki D, Abe H, Tsunoda T, Kamatani N, Chayama K, Nakamura Y, Matsuda K. A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population. Human Molecular Genetics. 2011 Oct 1;20(19):3884-92. doi: 10.1093/hmg/ddr301. Epub 2011 Jul 12. PMID: 21750111

Ben Hamad M, Cornelis F, Mbarek H, Chabchoub G, Marzouk S, Bahloul Z, Rebai A, Fakhfakh F, Ayadi H, Petit-Teixeira E, Maalej A. Signal transducer and activator of transcription and the risk of rheumatoid arthritis and thyroid autoimmune disorders. Clinical and Experimental Rheumatology. 2011 Mar-Apr;29(2):269-74. Epub 2011 Apr 19. PMID: 21418779

Plant D, Flynn E, Mbarek H, Dieudé P, Cornelis F, Arlestig L, Dahlqvist SR, Goulielmos G, Boumpas DT, Sidiropoulos P, Johansen JS, Ørnbjerg LM, Hetland ML, Klareskog L, Filer A, Buckley CD, Raza K, Witte T, Schmidt RE, Worthington J. Investigation of potential non-HLA rheumatoid arthritis susceptibility loci in a European cohort increases the evidence for nine markers. Annals of the Rheumatic Diseases. 2010 Aug;69(8):1548-53. doi: 10.1136/ard.2009.121020. Epub 2010 May 24. PMID: 20498205

Mbarek H, Kallel-Sellami M, Zerzri Y, Dawidowicz K, Mejri K, Bardin T, Prum B, Dieudé P, Petit-Teixeira E, Cornélis F, Makni S. New rheumatoid arthritis genetic factor and C5 serum level. Annals of the Rheumatic Diseases. 2009 Sep;68(9):1508-9. doi: 10.1136/ard.2008.104935. PMID: 19674987

Mejri K, Mbarek H, Kallel-Sellami M, Petit-Teixeira E, Zerzeri Y, Abida O, Zitouni M, Ben Ayed M, Mokni M, Fezza B, Turki H, Tron F, Gilbert D, Masmoudi H, Prum B, Cornelis F, Makni S. TRAF1/C5 polymorphism is not associated with pemphigus. British Journal of Dermatology. 2009 Jun;160(6):1348-50. doi: 10.1111/j.1365-2133.2009.09136.x. Epub 2009 Apr 16. PMID: 19416238

Jacq L, Teixeira VH, Garnier S, Michou L, Dieudé P, Rocha D, Pierlot C, Lemaire I, Quillet P, Hilliquin P, Mbarek H, Petit-Teixeira E, Cornélis F. HSPD1 is not a major susceptibility gene for rheumatoid arthritis in the French Caucasian population. Journal of Human Genetics. 2007;52(12):1036-9. Epub 2007 Oct 11. PMID: 17925998

Mejri K, Kallel-Sellami M, Petit-Teixeira E, Abida O, Mbarek H, Zitouni M, Ben Ayed M, Teixeira VH, Mokni M, Fazza B, Turki H, Tron F, Gilbert D, Masmoudi H, Cornelis F, Makni S. PTPN22 R620W polymorphism is not associated with pemphigus. British Journal of Dermatology. 2007 Nov;157(5):1068-9. Epub 2007 Sep 13. PMID: 17854359

Jacq L, Garnier S, Dieudé P, Michou L, Pierlot C, Migliorini P, Balsa A, Westhovens R, Barrera P, Alves H, Vaz C, Fernandes M, Pascual-Salcedo D, Bombardieri S, Dequeker J, Radstake TR, Van Riel P, van de Putte L, Lopes-Vaz A, Glikmans E, Barbet S, Lasbleiz S, Lemaire I, Quillet P, Hilliquin P, Teixeira VH, Petit-Teixeira E, Mbarek H, Prum B, Bardin T, Cornélis F; European Consortium on Rheumatoid Arthritis Families. The ITGAV rs3738919-C allele is associated with rheumatoid arthritis in the European Caucasian population: a family-based study. Arthritis Research & Therapy. 2007;9(4):R63. PMID: 17615072

WORK EXPERIENCE

  • 2012- Present

    VRIJE UNIVERSITEIT AMSTERDAM

    Postdoctoral Research Fellow
    I work at the Dept. of Biological Psychology under the supervision of Prof. Dorret Boomsma, which hosts the Netherlands Twin Register.

  • 2010 - 2012

    UNIVERSITY OF TOKYO

    Postdoctoral Research Fellow
    I did my first postdoc at the University of Tokyo, Japan under the supervision of Prof. Yusuke Nakamura and Prof Koichi Matsuda at the Laboratory of Genome Technology, Human Genome Center, Institute of Medical Science.

  • 2006 - 2009

    UNIVERSITY EVRY VAL D’ESSONNE, PARIS

    PhD Student
    I conducted my PhD research under the supervision of Prof. François Cornelis at the Genopole Evry, European Laboratory of Research on Rheumatoid Arthritis, Evry, France. In end 2009 I defended my thesis, entitled “Identification of genes involved in rheumatoid arthritis”.

  • 2004-2006

    UNIVERSITY PARIS SUD XI

    Master’s Degree (Genomics)

  • 2000-2004

    University Tunis El Manar

    Faculty of Science
    I obtained a Bachelor’s Degree in Biotechnology

TEACHING

Teaching  Human Molecular Genetics course for Bachelor 3 students. This course covers both the functioning of DNA in the cell and recent techniques used in the laboratory to study DNA. This course will give students background and knowledge of DNA that can be used in the multidisciplinary field of Biological Psychology.
Hamdi MBAREK

MEDIA & PRESS

2016

Worldwide media coverage for the identification of fraternal twinning Genes (Mbarek et al. 2016, AJHG )

عناوين من الصحافة العالمية لتغطية إكتشاف جينات التوائم
Couverture mondiale des médias de l’identification des gènes de jumeaux fraternels

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Magazine Afrique Méditerranée Business - Juillet 2016

Hamdi MBAREK

WORLDWIDE MEDIA COVERAGE FOR THE DISCOVERY OF THE GENES THAT INFLUENCE HUMAN REPRODUCTIVE BEHAVIOR (BARBAN N, .. MBAREK H, .. ET AL. NATURE GENETICS 2016)

عناوين من الصحافة العالمية لتغطية إكتشاف الجينات التى تؤثر على السلوك الإنجابي البشري
Couverture mondiale des médias de la découverte des gènes qui influencent le comportement reproductif humain
 
 
 
 
 
 
 
 
-صحيفة العرب لندن
 
 
Hamdi MBAREK

Media coverage for the discovery of the genes that influence cannabis use (Stringer S, Minică CC, Verweij KJ, Mbarek H et al. 2016, Translational Psychiatry)

Ru.nl
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2014

CONTACT

VU University, Amsterdam

Transitorium building

Department Biological Psychology, Netherlands Twin Register

Room 2B09

Van der Boechorststraat 1, 1081 BT, Amsterdam, The Netherlands

Phone: +31-20-5983038

Email: h.mbarek at vu.nl

Fax: +31-20-5988832

Hamdi Mbarek ®

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